Modulation of bioelectric cues in the evolution of flying fishes [Data set]
Authors/Creators
- 1. Northeastern University Marine Science Center
- 2. Boston Children's Hospital
- 3. Wheaton College
- 4. Lehigh University
- 5. Washington University Medical School
- 6. University of Toronto-Scarborough
Description
Assembled reference contigs for protein-coding exons and conserved non-coding regions from targeted sequence enrichment of beloniform fishes.
Current citation: Daane JM, Blum N, Lanni J, Boldt H, Iovine MK, Johnson SL, Lovejoy NR, and MP Harris. (2021). Novel regulators of growth identified in the evolution of fin proportion in flying fish. bioRxiv. doi: 10.1101/2021.03.05.434157
-contigs.tar.gz contains the assembled contigs for each species. Each contig represents a targeted region with the addition of flanking DNA sequence
-cnes.tar.gz contains the targeted conserved non-coding regions isolated from the larger contigs in contigs.tar.gz
-exons.tar.gz contains the targeted protein coding exons isolated from the larger contigs in contigs.tar.gz
-translated_exons.tar.gz contains the translated protein coding exons from exons.tar.gz
-Beloniformes.tre is the species tree
-medaka_cne_great.txt contains the associations between the assembled CNEs and neighboring protein-coding genes based on the GREAT approach
Files
medaka_cne_great.txt
Files
(1.8 GB)
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Additional details
Funding
- National Institutes of Health
- Genetics and Molecular Mechanisms Underlying Overgrowth Disorders of the Limb 5R01HD084985-03