Data from: Convergent changes in gene expression associated with repeated transitions between hummingbird and bee pollinated flowers

Transcriptomic data for 6 Gesneriaceae species (Nemathanthus albus -NA-, N. fritchii -NF-, Sinningia eumorpha -SE-, S. magnifica -SM-, Vanhouttea calcarata -VC-, Paliavana tenuiflora -PV-), presented in "Convergent changes in gene expression associated with repeated transitions between hummingbird and bee pollinated flowers". For each species, transcriptomes were obtained from RNA collected from flowers at three different developmental stages.

The following files are availables:

Trimmed_Species_Trinity.fasta: Transcriptome assembly of the species in fasta format. The transcriptomes were obtained from RNA-Seq (Illumina paired-end reads) of three different floral developmental stages. For more information, please refer to the publication.

ORF_AllSpecies_Pep.fasta: Predicted protein sequences for each transcript of each species.

ORF_AllSpecies_CDS.fasta: Predicted coding sequences (CDS) for each transcript of each species.

BLASTP_allgenes6species.FINAL.txt: Blastp annotation for each transcript of each species.

BLASTX_allgenes6species.FINAL.txt: Blastx annotation for each transcript of each species.

groups.txt : Orthologous groups (OG) between the six species obtained with OrthoMCL. For more information, please refer to the publication.

1to1_OG.txt: Obtained single-copy orthologs (1-to-1 orthologous groups) between the six species

OG_and_genes.txt : link between orthologous groups and genes ID for each species.

For more information, please refer to the publication.