Software Open Access
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.12.0-rc1
Gorgolewski, Krzysztof J.;
Esteban, Oscar;
Burns, Christopher;
Ziegler, Erik;
Pinsard, Basile;
Madison, Cindee;
Waskom, Michael;
Ellis, David Gage;
Clark, Dav;
Dayan, Michael;
Manhães-Savio, Alexandre;
Notter, Michael Philipp;
Johnson, Hans;
Dewey, Blake E;
Halchenko, Yaroslav O.;
Hamalainen, Carlo;
Keshavan, Anisha;
Clark, Daniel;
Huntenburg, Julia M.;
Hanke, Michael;
Nichols, B. Nolan;
Wassermann , Demian;
Eshaghi, Arman;
Markiewicz, Christopher;
Varoquaux, Gael;
Acland, Benjamin;
Forbes, Jessica;
Rokem, Ariel;
Kong, Xiang-Zhen;
Gramfort, Alexandre;
Kleesiek, Jens;
Schaefer, Alexander;
Sikka, Sharad;
Perez-Guevara, Martin Felipe;
Glatard, Tristan;
Iqbal, Shariq;
Liu, Siqi;
Welch, David;
Sharp, Paul;
Warner, Joshua;
Kastman, Erik;
Lampe, Leonie;
Perkins, L. Nathan;
Craddock, R. Cameron;
Küttner, René;
Bielievtsov, Dmytro;
Geisler, Daniel;
Gerhard, Stephan;
Liem, Franziskus;
Linkersdörfer, Janosch;
Margulies, Daniel S.;
Andberg, Sami Kristian;
Stadler, Jörg;
Steele, Christopher John;
Broderick, William;
Cooper, Gavin;
Floren, Andrew;
Huang, Lijie;
Gonzalez, Ivan;
McNamee, Daniel;
Papadopoulos Orfanos, Dimitri;
Pellman, John;
Triplett, William;
Ghosh, Satrajit
Release 0.12.0-rc1 (April 20, 2016)
- ENH: Add nipype_crash_search command (https://github.com/nipy/nipype/pull/1422)
- ENH: Created interface for BrainSuite Cortical Surface Extraction command line tools (https://github.com/nipy/nipype/pull/1305)
- FIX: job execution on systems/approaches where locale is undefined (https://github.com/nipy/nipype/pull/1401)
- FIX: Clean up byte/unicode issues using subprocess (https://github.com/nipy/nipype/pull/1394)
- FIX: Prevent crash when tvtk is loaded - ETS_TOOLKIT=null (https://github.com/nipy/nipype/pull/973)
- ENH: New interfaces in dipy: RESTORE, EstimateResponseSH, CSD and StreamlineTractography (https://github.com/nipy/nipype/pull/1090)
- ENH: Added interfaces of AFNI (https://github.com/nipy/nipype/pull/1360, https://github.com/nipy/nipype/pull/1361, https://github.com/nipy/nipype/pull/1382)
- ENH: Provides a Nipype wrapper for antsJointFusion (https://github.com/nipy/nipype/pull/1351)
- ENH: Added support for PETPVC (https://github.com/nipy/nipype/pull/1335)
- ENH: Merge S3DataSink into DataSink, added AWS documentation (https://github.com/nipy/nipype/pull/1316)
- TST: Cache APT in CircleCI (https://github.com/nipy/nipype/pull/1333)
- ENH: Add new flags to the BRAINSABC for new features (https://github.com/nipy/nipype/pull/1322)
- ENH: Provides a Nipype wrapper for ANTs DenoiseImage (https://github.com/nipy/nipype/pull/1291)
- FIX: Minor bugfix logging hash differences (https://github.com/nipy/nipype/pull/1298)
- FIX: Use released Prov python library (https://github.com/nipy/nipype/pull/1279)
- ENH: Support for Python 3 (https://github.com/nipy/nipype/pull/1221)
- FIX: VTK version check missing when using tvtk (https://github.com/nipy/nipype/pull/1219)
- ENH: Added an OAR scheduler plugin (https://github.com/nipy/nipype/pull/1259)
- ENH: New ANTs interface: antsBrainExtraction (https://github.com/nipy/nipype/pull/1231)
- API: Default model level for the bedpostx workflow has been set to "2" following FSL 5.0.9 lead
- ENH: New interfaces for interacting with AWS S3: S3DataSink and S3DataGrabber (https://github.com/nipy/nipype/pull/1201)
- ENH: Interfaces for MINC tools (https://github.com/nipy/nipype/pull/1304)
- FIX: Use realpath to determine hard link source (https://github.com/nipy/nipype/pull/1388)
- FIX: Correct linking/copying fallback behavior (https://github.com/nipy/nipype/pull/1391)
- ENH: Nipype workflow and interfaces for FreeSurfer's recon-all (https://github.com/nipy/nipype/pull/1326)
- FIX: Permit relative path for concatenated_file input to Concatenate() (https://github.com/nipy/nipype/pull/1411)
- ENH: Makes ReconAll workflow backwards compatible with FreeSurfer 5.3.0 (https://github.com/nipy/nipype/pull/1434)
| Name | Size | |
|---|---|---|
|
nipype-0.12.0-rc1.zip
md5:b5a4404044fe29079f783f0765c01e16 |
3.7 MB | Download |
| All versions | This version | |
|---|---|---|
| Views | 7,573 | 754 |
| Downloads | 769 | 29 |
| Data volume | 3.0 GB | 107.9 MB |
| Unique views | 6,068 | 713 |
| Unique downloads | 276 | 24 |
Indexed in
- Publication date:
- April 21, 2016
- DOI:
-
- Keyword(s):
- neuroimaging workflow pipeline
- Related identifiers:
- Previous versions
- Supplement to
- License (for files):
- Apache License 2.0