Published May 2, 2022 | Version 1.0

DCSsim (simulated) and DCSsub (sub-sampled) ChIP-seq data for benchmarking DCS tools.

  • 1. Institute for Medical Biochemistry, University of Veterinary Medicine Vienna

Description

These data are the results from five independent runs of DCSsim and DCSsub for TF, sharp and broad mark signals in 50:50 and 100:0 regulation scenarios.

 

Simulated data from DCSsim: simulated_ChIP-seq_data.zip

  • Set1: TF 50:50
  • Set2: TF 100:0
  • Set3: Sharp mark 50:50
  • Set4: Sharp mark 100:0
  • Set5: Broad mark 50:50
  • Set6: Broad mark 100:0

 

Sub-sampled data from DCSsub: sub-sampled_ChIP-seq_data.zip

  • Set1: Cebpa-ChIP-seq 50:50
  • Set2: Cebpa-ChIP-seq 100:0
  • Set3: H3K27ac-ChIP-seq 50:50
  • Set4: H3K27ac-ChIP-seq 100:0
  • Set5: H3K36me3-ChIP-seq 50:50
  • Set6: H3K36me3-ChIP-seq 100:0

Files

simulated_ChIP-seq_data.zip

Files (23.8 GB)

Name Size
md5:0086728df330a4378ab73611a0fd705f
18.0 GB Preview Download
md5:ac57e93b1fba3dcddb390847b9369e57
5.9 GB Preview Download

Additional details

References