Software Open Access

tferr/Scripts: BAR 1.5.1

Tiago Ferreira; Mark Hiner; Curtis Rueden; Kota Miura; Jan Eglinger; Bitdeli Chef

This is the largest update so far. Highlights:

  • Several IJ1 plugins rewritten as IJ2 Scijava commands
  • All core files are now distributed inside a single jar, and are no longer spread across the ImageJ directory
  • Offline help displays the README.md files displayed by GitHub when browsing directories in the repository
  • Several routines for time series analysis (such as calcium imaging experiments)
  • Several scripts are now installed in the Script Editor Templates menu
  • User scripts are now placed in a more convenient location: the /scripts/BAR/ directory in ImageJ root directory (rather than the convoluted /plugins/scripts/BAR/(...) location
  • My Routines supersedes My Snippets
  • BAR is now more diverse with code written in more languages e.g., Clojure and Groovy
  • Support for multichannel profiles for images with more than 7 channels

[Uploaded to the BAR update site on 2017.04.05]

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