Dataset Open Access

Training data for MaxQuant and Msstats label-free analysis in Galaxy

Melanie Christine Föll

The files serve as input and intermediate results for a MaxQuant and Msstats training on skin cancer tissues (https://doi.org/10.1016/j.matbio.2017.11.004) in the Galaxy training network (https://training.galaxyproject.org).

Input files: human FASTA database for Maxquant. Annotation file and comparison matrix file for Msstats.

Intermediate result files: MaxQuant protein groups, evidence and PTXQC.

Files (135.5 MB)
Name Size
input_annotation_file.tabular
md5:bfae4be145e13fa7cc54a3697d441c82
775 Bytes Download
input_comparison_matrix.tabular
md5:5e1fa68ca4cf71a20e1fccb90f50d1ef
34 Bytes Download
input_protein_database.fasta
md5:c49667f05cbbd7adf296c42377b7cedd
13.6 MB Download
MaxQuant_Evidence.tabular
md5:e7090504159eddbc4905a2e8230e15b2
114.9 MB Download
MaxQuant_proteingroups.tabular
md5:e38f4d85727c5457f18560c6aa45353f
6.0 MB Download
PTXQC_report.pdf
md5:e9ba42c67af4614c5c0d6bfa2ef052d3
920.1 kB Download
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