Published May 20, 2021 | Version v1

The role of conserved residues in the DEDDh motif: the proton transfer mechanism of HIV-1 RNase H

  • 1. Unversity of Konstanz, Department of Chemistry, King's College London, London, SE1 1DB, United Kingdom
  • 2. Department of Chemistry, King's College London, London, SE1 1DB, United Kingdom
  • 3. Department of Physics and Astronomy, University College London; London WC1E 6BT, United Kingdom
  • 4. Universoty of Konstanz
  • 5. Department of Chemistry and Biochemistry, University of Oklahoma, 101 Stephenson Parkway, Norman, OK 73019–5251, USA
  • 6. Department of Chemistry, King's College London, London, SE1 1DB, United Kingdom, Department of Physics and Astronomy, University College London; London WC1E 6BT, United Kingdom

Description

Supplemental information containing

  •  PyMol session of aligned structures for Figure 6
  • PyMol session of aligned metal ion binding sites for site F, C from MD simulation of HIV-1 RNase H, crystal of 2NUG and crystal of BhRNase H 600 sec 6DOG
  •  QM/MM geometries (slightly edited to get consistent bonds, no changed coordinates)
  • Source code of interactive figure

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Additional details

Related works

Is supplement to
Journal article: 10.1021/acscatal.1c01493 (DOI)