Dataset Open Access

PhenCards v.1.0.0 database

Havrilla, James; Liu, Cong; Dong, Xiangchen; Weng, Chunhua; Wang, Kai

A db-release of PhenCards to coincide with the release of the paper

This is a citable repo with a zip file of everything used to make the Elasticsearch Lucene index database for PhenCards v1.0.0.

This includes all data, like HPO, ICD, UMLS (without restricted sources), IRS data, Open990 data.  Because of Open990, we cannot make it commercially available, but it is still fully open source for academics.

However, we also provide the code for preprocessing of the data for Lucene indexing.

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