Published May 6, 2021
| Version 1.2.0
Software
Open
CostaLab/CrossTalkeR
Authors/Creators
- 1. Institute for Computational Genomics, Faculty of Medicine, RWTH Aachen University, Aachen, 52074 Germany
- 2. Department of Hematology, Erasmus Medical Center, Rotterdam, 3015GD, the Netherlands
- 3. Department of Computer Science, RWTH Aachen University, Germany
Description
CrossTalkeR is a framework for network analysis and visualisation of LR networks. CrossTalkeR identifies relevant ligands, receptors and cell types contributing to changes in cell communication when contrasting two biological states: disease vs. homeostasis. A case study on scRNA-seq of human myeloproliferative neoplasms reinforces the strengths of CrossTalkeR for characterisation of changes in cellular crosstalk in disease state.
Updated version @ https://github.com/CostaLab/CrossTalkeR
Files
Files
(38.8 MB)
| Name | Size | Download all |
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md5:e53cdc0b7b686fbde8f45a7ee81089e5
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38.8 MB | Download |
Additional details
Related works
- Is derived from
- Software: https://github.com/CostaLab/CrossTalkeR (URL)