BridgeDb

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Published April 26, 2021 | Version release_3.0.4
Software Open

bridgedb/BridgeDb: BridgeDb 3.0.4

Authors/Creators

  • 1. @BiGCAT-UM
  • 2. @nrnb
  • 3. eScience lab, University of Manchester
  • 4. Gladstone Institutes
  • 5. UM @BiGCAT-UM
  • 6. myGrid
  • 7. Heriot-Watt University
  • 8. Maastricht University

Description

First public release of BridgeDb 3.0, a major version upgrade. It includes all the many small updates in the 2.3 seriese, but also introduces new features: support for secondary identifiers (identifiers that are not removed or deleted yet, but which have a better identifier), compact identifier support, no longer has the main copy of datasources.tsv, updates the versions of many dependencies, and a tool for create VoID header files. Java 8 and 11 are supported

This version has now seen several months of use in production and everyone is recommended to upgrade to BridgeDb 3.0.

The below examples assume you need just org.bridgedb.bio, and you can use it as template and modify to add other modules.

For Maven:

<dependencies>
    <dependency>
        <groupId>org.bridgedb</groupId>
        <artifactId>org.bridgedb.bio</artifactId>
        <version>3.0.4</version>
    </dependency>
</dependencies>

For Gradle:

compile group: 'org.bridgedb', name: 'org.bridgedb.bio', version: '3.0.4'

For Ivy:

<dependency org="org.bridgedb" name="org.bridgedb.bio" rev="3.0.4"/>

For Buildr:

'org.bridgedb:org.bridgedb.bio:jar:3.0.4'

Files

bridgedb/BridgeDb-release_3.0.4.zip

Files (11.1 MB)

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md5:61cfee94e0b46555bd735b5f6e14e48c
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Additional details

Related works

Is supplement to
https://github.com/bridgedb/BridgeDb/tree/release_3.0.4 (URL)