Published April 26, 2021
| Version V1
Dataset
Open
Multiscale phase separation by percolation model with the single chromatin loop resolution
Authors/Creators
- 1. University of Warsaw
- 2. Warsaw University of Technology
- 3. Aliah University
Description
GM12878.CTCF.clusters all_edges.csv:- This file contains the set of whole-genome chromatin interactions detected using the ChIA-PET method for CTCF protein that was used in our project.
GM12878_subcompartments.csv:- Contains the bins classified into compartments as per Rao et.al. paper.
hg19_PET2+_featuretable.tar.gz:- Contains tab-separated files for features sets calculated over loops for each chromosome.
anchors_hg19_PET2+_featuretable.tar.gz:- Contains tab-separated files for features sets calculated over anchors for each chromosome.
Notes
Contact author :- Dariusz Plewczyński d.plewczynski@mini.pw.edu.pl