Published April 22, 2021
| Version v1
Dataset
Open
Simulated allele count and Pool-Seq read count data used for illustration purposes in the vignette for the R package poolfstat (version 2+)
Description
Three files are included in the data set:
- sim6p.genotreemix.gz: contains simulated allele count data for each SNP and each of the 6 populations stored in the format used by the TreeMix population genetics software
- sim6p.snpinfo.gz: contains mapping information (SNP name, chromosome and position) of the simulated SNPs
- sim6p.poolseq30X.vcf.gz: contains simulated Pool-Seq read count data (30X average coveage) for each SNP and each of the 6 populations stored in a vcf format (similar to the one obtained with the VarScan software)