Software Open Access

SpatialDWLS: accurate deconvolution of spatial transcriptomic data

Rui Dong; Guo-Cheng Yuan

SpatialDWLS is a tool to quantitatively estimate the cell-type composition at each spatial location of spatial transcriptomic datasets. It is implemented in Giotto and the codes are for simulated seqFISH+, Visium brain and human heart spatial transcriptomic datasets. 

Files (93.8 MB)
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Datasets.zip
md5:a16a9e917f1e6e453a48108c15437f1b
90.6 MB Download
Results.zip
md5:4eb5b6ecc7a3ee8bc558df60a11cfbed
3.2 MB Download
spatialDWLS_running_Codes.zip
md5:0ba1c7d306f23614a10a76eb2ee125fd
12.4 kB Download
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