Published February 29, 2016 | Version v1
Dataset Open

Updated simulated data for testing cell type adjustment methods

  • 1. McGill University
  • 2. McGill University, Lady Davis Institute

Description

Different simulation scenarios on which to test cell type adjustment methods for epigenome-wide association studies.  Each .RData file contains a matrix of methylation beta-values from a simulated blood cell mixture "sim_beta", a list of simulated differentially methylated positions "dmr", and a phenotype "disease_status".  Updated version with new simulation scenarios.  Each of "simulated_data_many_assoc.tar.gz" and "simulated_data_few_assoc.tar.gz" contain 10 replications of those simulation scenarios.  The other .RData files represent only one replication of each scenario.

Files

Files (3.5 GB)

Name Size Download all
md5:d8ee8e754bcb59804f117d811ad3459c
145.0 MB Download
md5:a9d1099bc633d41f9ee6c9c0a97159a3
145.0 MB Download
md5:13a215ea27f94819191749c926a4c260
1.3 GB Download
md5:0f7311369948f6ce5a97a91abd82167d
145.0 MB Download
md5:e2282c2a887395a71e22496165ae8524
145.0 MB Download
md5:1e977c116a9a40659624a59132589651
1.3 GB Download
md5:018f2f6d4387c5afa2ad6def5ae8f5a1
145.0 MB Download
md5:a1d739cc9d9ac41c8a1f0a500cc92744
145.0 MB Download