Published July 5, 2020
| Version 12/2/2020 Data Version v.2
Dataset
Open
Sensible_Structures Data v.2
Authors/Creators
- 1. Hauptman-Woodward Medical Research Institute
- 2. University of Pittsburgh
Description
Data scrape of the PDB 12/9/2019 (v.1 used in Lynch, et al. Patterns 2020, https://doi.org/10.1016/j.patter.2020.100024)
Files:
v.1
structures.pkl: raw data file (n = 133,737)
sensible_structures.pkl/.xml/.csv: data files parsed through dictionary (n=99,229)
Updated data scrape of the PDB 12/2/2020 v.2
structures_Dec2020.pkl: raw data file (n = 144,656)
sensible_structures_Dec2020.pkl/.xml/.csv: data files parsed through dictionary (n=107,621)
Updated versions of data scrape using the code described in the paper will be provided as they occur, in versioned history.
Files
sensible_structures.csv
Files
(1.1 GB)
| Name | Size | Download all |
|---|---|---|
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md5:1f8a4a1a9fc4620fa3d0d7928ae6d1ac
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96.7 MB | Preview Download |
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md5:ace674b76aa88a47491a2febf367b372
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101.7 MB | Download |
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md5:28622c520126d0e1933cc5c1eea7580f
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165.8 MB | Preview Download |
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md5:f310c59837fc96cb435594499a8ad362
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104.7 MB | Preview Download |
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md5:3616a7888353a3ab8a45032049b2f232
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118.0 MB | Download |
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md5:59c8c116c06b520d4350c4906c28d805
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179.6 MB | Preview Download |
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md5:4779e812abc5a0a9f8458b5c9e42d088
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141.6 MB | Download |
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md5:1e5b00d881567e7515397beaef9cf328
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164.1 MB | Download |
Additional details
Related works
- Is documented by
- Journal article: 10.1016/j.patter.2020.100024 (DOI)