Published March 24, 2021 | Version 0.0.1

Custom and Standard reference protein datasets used for publication Computational challenges to reproducibility, robustness, extensibility and reuse in multi-omics: a meta-workflow-based case study

  • 1. Stanford
  • 2. Polytechnic University of Madrid

Description

Customized protein sequence databases used in the study: Computational challenges to reproducibility, robustness, extensibility and reuse in multi-omics: a meta-workflow-based case study.

Custom datasets: custom_merged_OV.fasta, custom_merged_BRCA.fasta, custom_merged_CRC95.fasta

Reference datasets: hg19_refseq_pro_seq.fasta,  humanRefSeq_Version54_with_tryp_DECOY.fasta

These datasets have been used with the Docker image archived in  http://doi.org/10.5281/zenodo.4612080

Files

Files (990.0 MB)

Name Size
md5:8e1b1a7e4b57f5ad4fc848cefd593633
341.6 MB Download
md5:2bd96f29b8c9eaf7468eeae17e37caab
236.4 MB Download
md5:2005a040bd35f81981b9a49988f8c875
342.9 MB Download
md5:ab5ee504c760d8d6d0fc18c711d0f21f
23.2 MB Download
md5:b2978c1178acde0c7bf4249664dd2b37
45.9 MB Download