Published June 26, 2020 | Version v1.2
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Multiscale analysis of a regenerating axolotl humerus. Supplementary material for 3D Visualization of Macromolecule Synthesis.

Authors/Creators

  • 1. Northeastern University
  • 2. Universitat Politècnica de Catalunya
  • 3. University of Technology of Compiègne

Description

This document describes in detail the process followed in Fiji and MATLAB to obtain the results shown in Figures 3 and 4 of the manuscript:

Duerr et al. (2020), 3D Visualization of Macromolecule Synthesis, bioRxiv doi: 10.1101/2020.06.24.169300.

It is written as a step-by-step tutorial aimed at inexperienced users of Fiji and/or MATLAB. The scripts mentioned here are also provided as supplementary material and contain self-explanatory annotations of their contents.

 

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codes_MultiscaleAnalysis_v2.zip

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Additional details

Related works

Is supplement to
Preprint: 10.1101/2020.06.24.169300 (DOI)

Funding

U.S. National Science Foundation
Mechanobiology of Joint Morphogenesis: Manipulating Salamander Limbs 1727518
European Commission
COMPLIMB - A computational tool to elucidate the mechanobiological regulation of limb development 841047