Published March 10, 2021
| Version v1
Dataset
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Recombination detection program (RDP4) results for ACMBFV, ACMV, CMMGV, EACMCV, EACMV, EACMKV, EACMMV, EACMZV, SACMV DNA-A sequences
Description
A DNA-A multiple alignment (Zenodo record 4592860) was scanned with RDP4.100 (D. Martin et al. 2015). The input sequences belong to 9 species: ACMBFV, ACMV, CMMGV, EACMCV, EACMV, EACMKV, EACMMV, EACMZV, SACMV. Recombination breakpoints for events with statistical support from at least 5 of 7 methods were adjusted per the manual. A CSV file with the results was exported and then saved in Excel format.
These results will be described in a manuscript by Crespo-Bellido et al.
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Additional details
Funding
- U.S. National Science Foundation
- PIRE: U.S.-East Africa Research and Education Partnership: Cassava mosaic disease - A paradigm for the evolution of insect-transmitted plant virus pathosystems 1545553