Published March 9, 2021 | Version v0.1-beta
Software Open

ImmobileParticles_MatchAndAnalyse: python code used for analysis of image data in Lenz et al. 2021, "Measuring impacts of microplastic treatments via image recognition on immobilised particles below 100 µm"

Authors/Creators

  • 1. Leibniz Institute for Baltic Sea Research Warnemünde
  • 2. Leibniz Institute for Polymer Research
  • 3. University of Gothenburg

Description

This release contains all files as they were used in the analysis of the image data and to prepare the manuscript. At this stage, to run the analysis, paths to images and csv files need to be set manually in order to work on your system. Also several TODOs and comments from the development phase are left inside some files, to enable easier continuation of development work at a later point.

Feel free to open issues on github, if you are experiencing problems using the code.

https://github.com/robna/ImmobileParticles_MatchAndAnalyse

Notes

Funding of this study was received from the project MicroCatch_balt (German Federal Ministry of Education and Research (BMBF), grant number 03F0788A) and the BONUS project Micropoll (funded jointly by the European Union and the BMBF, grant number 03F0775A).

Files

robna/ImmobileParticles_MatchAndAnalyse-v0.1-beta.zip

Files (46.5 kB)

Additional details

Related works

Is source of
Figure: 10.5281/zenodo.4568525 (DOI)
Is supplement to
Software: https://github.com/robna/ImmobileParticles_MatchAndAnalyse/tree/v0.1-beta (URL)
Is supplemented by
Dataset: 10.5281/zenodo.4568489 (DOI)

Funding

European Commission
BONUS - Joint Baltic Sea Research and Development Programme (BONUS) undertaken by several Member States with the participation of the Union 271534