Dataset Open Access

Pre-processing scRNA-seq data using Alevin in Galaxy

Bacon, Wendi Anne

These datasets, from either 10.3389/fimmu.2018.02523 or Ensembl's reference datasets, are required for users to following through the Pre-processing with Alevin tutorial.

Files (1.5 GB)
Name Size
Experimental_Design.tabular
md5:93cdeb85fd236ff80a7131c06cb0d567
93 Bytes Download
Mus_musculus.GRCm38.100.gtf.gff
md5:23111191ca1cb7344776b1c1f3ddb08d
1.0 GB Download
Mus_musculus.GRCm38.cdna.all.fa.fasta
md5:a921057c33afccb92fd7972668eadb8d
253.6 MB Download
N701-400k-AnnData.h5ad
md5:e2c8917e5e5c27906741f3cb3de4b288
4.2 MB Download
N702-400k-AnnData.h5ad
md5:47ae1f43d10f971c1814a9f753c08b9c
4.1 MB Download
N703-400k-AnnData.h5ad
md5:c2036c30cfe729f6223aedb657e6a2fe
4.1 MB Download
N704-400k-AnnData.h5ad
md5:d5357ba634d16429fe30755de862acd6
4.1 MB Download
N705-400k-AnnData.h5ad
md5:bec72e91a80b152b0ef6eda1b7615cff
4.6 MB Download
N706-400k-AnnData.h5ad
md5:f9367602160bb5c27005ff9f342282ad
4.2 MB Download
N707-400k-AnnData.h5ad
md5:f520299b74f9904b87e98e5f57c30037
4.3 MB Download
SLX-7632.TAAGGCGA.N701.s_1.r_1.fq-400k.fastq
md5:0bb32c916db91a507655a40304f2197f
39.8 MB Download
SLX-7632.TAAGGCGA.N701.s_1.r_2.fq-400k.fastq
md5:d1f07d846b49409a54da95fd251ac156
102.2 MB Download
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