Cantu Lab
Published February 22, 2021 | Version v1
Dataset Restricted

Rootstocks influence the responses of ripening grape berries to leafroll associated viruses

Description

Grapevine leafroll-associated virus (GLRaV) infections are accompanied by symptoms with varying severity. Data were collected from Cabernet franc grapevines with zero, one, or pairs of leafroll infection(s) and grafted to different rootstocks. RNA sequencing data were mapped to a high-quality Cabernet franc genome reference, which was sequenced and assembled to carry out this study. This study identified several molecular levers that participate in responses to GLRaVs, including those that are condition dependent. 

This work was funded by the Pierce’s Disease and Glassy-winged Sharpshooter Research Board of the California Department of Food and Agriculture (project 17-0417-000-SA). DC was partially supported by the Louis P. Martini Endowment in Viticulture.

This dataset includes

Cabernet Franc genomic sequences:
Whole genome assembly
Primary scaffolds
Haplotigs

Cabernet Franc feature annotations:
Gene annotation
Repeat annotation

Cabernet Franc feature sequences:
CDS sequences
mRNA sequences
Protein sequences

RNA sequencing experiment data:
Raw counts per library per gene
Sample key

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