Published March 2, 2021
| Version v1
Dataset
Open
SI Datasets - Strullu-Derrien et al - An expanded diversity of oomycetes in Carboniferous forests: Reinterpretation of Oochytrium lepidodendri (Renault 1894) from the Esnost chert, Massif Central, France
Authors/Creators
- 1. Institut Systématique Evolution Biodiversité, Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, Paris, France / Department of Earth Sciences, The Natural History Museum, London, UK
- 2. Centre de microscopie et d'imagerie numérique du muséum, Muséum National d'Histoire Naturelle, Paris, France
- 3. Department of Earth Sciences, The Natural History Museum, London, UK / Department of Earth Science & Engineering, Imperial College London, London, UK
- 4. Centre de Recherche en Paléontologie Paris, Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, Paris, France
- 5. Department of Earth Sciences, The Natural History Museum, London, UK
- 6. Department of Plant Taxonomy and Nature Conservation, University of Gdańsk, Wita Stwosza 59, 80-308 Gdańsk, Poland
- 7. Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, USA
Description
SI dataset related to the 3D reconstructions presented in: An expanded diversity of oomycetes in Carboniferous forests: Reinterpretation of Oochytrium lepidodendri (Renault 1894) from the Esnost chert, Massif Central, France
Two .zip archive are provided, these form the basis for the published three-dimentional reconstruction SI videos and figures. The folder struture in each zip is as follows:
- airyscan_raw_data - Raw data from the Airyscan confocal microscope (see published paper for full details). This is in its native .czi format.
- dragonfly - Dragonfly (https://www.theobjects.com/dragonfly/) session data. Contains the segmentation data.
- model_stls - Exported stl format meshes from Dragonfly, used for imprtortation into Blender to create the published videos.
- videos - Videos related to this data. Either .mp4 or .avi format.
- z-stack_bmp - Tomogrpahic dataset of slice images extracted from raw data in .bmp format.
- z-stack_tiffs - Tomogrpahic dataset of slice images extracted from raw data in .tiff format.
Files
si_1_data.zip
Additional details
Related works
- Is cited by
- Journal article: 10.1371/journal.pone.0247849 (DOI)