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Dataset Open Access

The Natural Products Atlas - data download

Jeffrey A. van Santen; Roger G. Linington; NP Atlas Contributors

Download files from the Natural Products Atlas (npatlas.org).

van Santen, J. A.; Jacob, G.; Leen Singh, A.; Aniebok, V.; Balunas, M. J.; Bunsko, D.; Carnevale Neto, F.; Castaño-Espriu, L.; Chang, C.; Clark, T. N.; Cleary Little, J. L.; Delgadillo, D. A.; Dorrestein, P. C.; Duncan, K. R.; Egan, J. M.; Galey, M. M.; Haeckl, F. P. J.; Hua, A.; Hughes, A. H.; Iskakova, D.; Khadilkar, A.; Lee, J.-H.; Lee, S.; LeGrow, N.; Liu, D. Y.; Macho, J. M.; McCaughey, C. S.; Medema, M. H.; Neupane, R. P.; O’Donnell, T. J.; Paula, J. S.; Sanchez, L. M.; Shaikh, A. F.; Soldatou, S.; Terlouw, B. R.; Tran, T. A.; Valentine, M.; van der Hooft, J. J. J.; Vo, D. A.; Wang, M.; Wilson, D.; Zink, K. E.; Linington, R. G.* "The Natural Products Atlas: An Open Access Knowledge Base for Microbial Natural Products Discovery”, ACS Central Science2019, 5, 11, 1824-1833. 10.1021/acscentsci.9b00806

 

Now includes ontological data from:

NP Classifier - https://npclassifier.ucsd.edu/

ClassyFire - http://classyfire.wishartlab.com/

Including archived versions, extra data download types, and new MIBiG and GNPS IDs

Files (1.0 GB)
Name Size
np_atlas_2018_07.tsv
md5:af7ab122b4b5736bc2c8deafd1e65cd8
14.9 MB Download
np_atlas_2018_09.tsv
md5:09f05172730d05130ce1896d2ee1bbb2
14.9 MB Download
np_atlas_2019_02.tsv
md5:799f2aaa756c352d8b4f5f65297f4f67
15.3 MB Download
np_atlas_2019_08.tsv
md5:6d148e37ba6b71431190450ad8bf8e48
18.5 MB Download
np_atlas_2019_12.tsv
md5:380390732ecb4ffe9f29c7a73c68e3b5
19.5 MB Download
np_atlas_2020_06.sdf
md5:eeb8405d13ee810f49f8b37c235ba43b
148.6 MB Download
np_atlas_2020_06.tsv
md5:523ecd675f853e660096ddaccdbe0aad
24.0 MB Download
np_atlas_2020_06_classyfire.json
md5:ca5f5889def63e20a96e932fc1373bc5
232.9 MB Download
np_atlas_2020_06_npclassifier.json
md5:6be202b80cbcea014695935bf043d7c3
540.0 MB Download
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Data volume 5.2 GB2.0 GB
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