Results for 2,230 UK Biobank binary and continuous traits

Results for 2,230 UK Biobank binary and continuous traits. 

We applied the gene-based tests (Gene1D, Gene3D, GeneScan1D and GeneScan3D) to 1,403 UK Biobank binary phecodes and 827 continuous phenotypes (797 continuous traits + 30 biomarkers) using GWAS summary statistics on 28 million imputed variants. 

The results are in 3 different zipped folders: 'GeneScan3D_UKBB_1403binary_results.zip', 'GeneScan3D_UKBB_797continuous_results.zip' and 'GeneScan3D_UKBB_30biomarkers_results.zip'. A list of all 2,230 binary and continuous phenotypes is available in excel file 'UKBB_phenotype_description.xlsx'.

Reference: Ma, S., Dalgleish, J. L ., Lee, J., Wang, C., Liu, L., Gill, R., Buxbaum, J. D., Chung, W., Aschard, H., Silverman, E. K., Cho, M. H., He, Z. and Ionita-Laza, I. "Improved gene-based testing by integrating long-range chromatin interactions and knockoff statistics", 2021