Dataset Open Access

Raw and processed GO term data to support running GCEA analyses using ensemble-based nulls, as described in the manuscript, 'Overcoming bias in gene category enrichment analyses of brain-wide transcriptomic data'.

Fulcher, Ben D.

Data to support a toolbox for performing gene category enrichment analyses, including against ensembles of null phenotypes.

Descriptions of how these data files can be used for this purpose are in the documentation for the toolbox, at https://github.com/benfulcher/GCEA_FalsePositives

Files (170.4 MB)
Name Size
ALL_MGI_ID_NCBI.csv
md5:19aad42c8583a778a5390893901ffdc3
2.1 MB Download
goa_human.gaf
md5:553ba06796392e1969136be7900dbb84
67.1 MB Download
GOAnnotationDirect-human-biological_process-Prop.mat
md5:b0b8b55b87bd93a7fedb3fa964928c1e
3.4 MB Download
GOAnnotationDirect-human.mat
md5:df27b67bf1239365f21a9f6e9befa6c7
3.4 MB Download
GOAnnotationDirect-mouse-biological_process-Prop.mat
md5:212cd60e1bbd7838872e001b7fafa6a5
4.0 MB Download
GOAnnotationDirect-mouse.mat
md5:76d2998a97a7f8b3f91bf3f6d1a3ee22
3.8 MB Download
GODaily_2021-01-25.sql
md5:853ab19e35eb1639576c195635637500
6.8 MB Download
GOTerms_BP.mat
md5:7424e2a7610f8b4529ad485fb538454f
646.1 kB Download
mgi.gaf
md5:21d37fff4ee5c80efcd40c2b6a273aca
79.2 MB Download
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