Published January 14, 2021
| Version 1
Dataset
Open
Transcript quantification data from Varabyou et al. 2020 simulations
Authors/Creators
- 1. New York Genome Center and NYU Center for Genomics and Systems Biology
- 2. Department of Computer Science, University of Maryland
- 3. Harvard Medical School
- 4. Friedrich Miescher Institute for Biomedical Research and SIB Swiss Institute of Bioinformatics
- 5. Computational Biology Department, School of Computer Science, Carnegie Mellon University
Description
Transcript quantification data from different methods and configurations and simulated counts for simulated samples. The quantification results are in quants.tar.gz, and the true transcript fragment counts are in true_counts.tar.gz.
Files
Files
(1.2 GB)
| Name | Size | Download all |
|---|---|---|
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md5:6b570cd0dc9c86f889616bb5b55b072b
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1.1 GB | Download |
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md5:7bf5ff4d1d686d316d1d3e2e398a82b4
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7.7 MB | Download |
Additional details
References
- Varabyou, Ales, Steven Lloyd Salzberg, and Mihaela Pertea. "Effects of transcriptional noise on estimates of gene and transcript expression in RNA sequencing experiments." Genome Research (2020): gr-266213.