Published November 22, 2020
| Version v1
Dataset
Open
3D models of mouse embryonic development (stl, converted from EMAP)
Description
A collection of readily-usable volumetric models for all tissues and stages of mouse peri-implantation development as extracted from the eMouse Atlas Project (E5.0 to E9.0), as well as custom-made models of all pre-implantation stages (E0 to E4.0). These models have been converted to a commonly used 3D format (.stl), and are provided in ready-made files for digital exploration and illustration.
Specifically:
- individual .stl models of embryonic subcomponents for each developmental stage (e.g. epiblast, visceral endoderm; 1 folder per EMAP embryonic stage)
- ready-made .blend files where such components have been reassembled as a full embryo model, and in a scene with pre-prepared light sources and aligned camera (1 file per embryonic stage)
- a .blend file with all embryonic models provided arranged in a temporal lineup; and a .blend file with a "starter-pack" of pre-made materials to use for easy illustration.
Also included are two data tables:
- "EMAP_key.xlsx" indicating the source of its model, and the embryonic stage corresponding to each Theiler Stage
- "EMAP_partslist.xlsx" containing the original name of each embryonic component provided (as used in EMAP), and the corresponding name used in this dataset.
Files
01_Individual stl components.zip
Files
(583.3 MB)
| Name | Size | |
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md5:efa2d18240eb191ff4cc3e91212e4d5f
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48.3 MB | Preview Download |
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md5:2895bcb554f040634aed130819b280bb
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258.6 MB | Preview Download |
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md5:4e31e8b8ba58dea39cf362bc5f94e508
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274.0 MB | Preview Download |
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md5:bfc5ef43dd942065c393f5dbc857c196
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9.5 kB | Download |
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md5:a8f0f3776e6ebc563e7bc8506e33a9f7
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16.6 kB | Download |
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md5:9861771f67cc550de112d4b8a2371a8b
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1.4 MB | Preview Download |
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md5:3f7df5f2565851eca3664becc663a78f
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943.3 kB | Preview Download |
Additional details
Related works
- Is documented by
- Preprint: 10.1101/2020.11.23.393991 (DOI)