Published October 14, 2020
| Version 1.0.0
Dataset
Open
pjhop/DNAmCrosshyb: hg38 and hg19 bisulfite-converted genomes (R .rds files)
Description
Bisulfite-converted genomes as used in the DNAmCrosshyb R package (github.com/pjhop/DNAmCrosshyb). Data is saved per chromosome in the ‘DNAString’ format as implemented in the Biostrings BioConductor package. The data is saved in the R rds file format and can be read using the ‘readRDS()’ function. Scripts used to generate these data can be found at https://github.com/pjhop/DNAmCrosshyb/blob/master/data-raw/bisulfite_convert_hg19.R and https://github.com/pjhop/DNAmCrosshyb/blob/master/data-raw/bisulfite_convert_hg38.R . See https://github.com/pjhop/DNAmCrosshyb for examples on how to map Illumina 450k/EPIC array probes to the bisulfite-converted genomes.