De novo transcriptome assembly of Lymnaea stagnalis snails exposed to immune elicitors and changes in environmental conditions
Authors/Creators
- 1. University of Innsbruck
- 2. ETH Zürich
- 3. Eawag
- 4. Åbo Akademi University
- 5. University of New Mexico
Description
This is a de novo transcriptome assembly for Lymnaea stagnalis (Gastropoda), generated from short-read based RNAseq data (Illumina NextSeq 500, PE-81). Experimental snails were exposed to the following treatments: (1) untreated, (2) anaesthesia, (3) wounding, (4) injection with Escherichia coli, (5) injection with Micrococcus lysodeikticus, (6) injection with extracts from healthy snail gonad, (7) injection with extracts from trematode-infected snail gonad, (8) elevated temperature, and (9) food deprivation.
Details of the study can be found in the associated publication (e.g., bioRxiv preprint; Seppälä et al. Transcriptome profiling of a multiuse model species Lymnaea stagnalis (Gastropoda) for ecoimmunological research).
Files
Files
(31.9 MB)
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