Published September 22, 2020 | Version v1
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De novo transcriptome assembly of Lymnaea stagnalis snails exposed to immune elicitors and changes in environmental conditions

  • 1. University of Innsbruck
  • 2. ETH Zürich
  • 3. Eawag
  • 4. Åbo Akademi University
  • 5. University of New Mexico

Description

This is a de novo transcriptome assembly for Lymnaea stagnalis (Gastropoda), generated from short-read based RNAseq data (Illumina NextSeq 500, PE-81). Experimental snails were exposed to the following treatments: (1) untreated, (2) anaesthesia, (3) wounding, (4) injection with Escherichia coli, (5) injection with Micrococcus lysodeikticus, (6) injection with extracts from healthy snail gonad, (7) injection with extracts from trematode-infected snail gonad, (8) elevated temperature, and (9) food deprivation.

Details of the study can be found in the associated publication (e.g., bioRxiv preprint; Seppälä et al. Transcriptome profiling of a multiuse model species Lymnaea stagnalis (Gastropoda) for ecoimmunological research).

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