Published September 10, 2020
| Version v0.4.0
Software
Open
dfsp-spirit/fsbrain: The paper release
Description
- Support passing a single data vector for both hemis combined to vis.data.on.subject and vis.symmetric.data.on.subject
- Add subject.num.verts function to easily retrieve the vertex counts of the meshes for a subject
- Support new background color layers 'curv_light' and 'sulc_light'
- The function vis.symmetric.data.on.subject defaults to a new colormap.
- The metadata IO function to read subjects files and demographics files no longer have a default for the 'header' parameter. This is to prevent people from accidently skipping the first subject.
- Add functions for reading and writing morph data to and from a single MGH or MGZ file: group.morph.standard.sf and write.group.morph.standard.sf
- Add function for writing FSGD files from demographics table (demographics.to.fsgd.file), and to read subjects list from FSGD files (read.md.subjects.from.fsgd)
- new method to set default resolution, and more consistent usage of defaults: fsbrain.set.default.figsize()
- Add group.surface function to load surfaces for a group of subjects
- Add functions for visualization of groups of subjects at once: vis.group.morph.native, vis.group.morph.standard, vis.group.annot, ...
- Extend advanced live notebook with group level plotting examples
- Better support for limiting the plotted data range
- Add new rendering style 'edges', expose style argument for more vis functions
- Fix bug in coloredmesh.from.morph.standard: custom template subject was ignored
- Add option to download a few files from fsaverage3 under FreeSurfer license. User needs to accept license.
Files
dfsp-spirit/fsbrain-v0.4.0.zip
Additional details
Related works
- Is supplement to
- https://github.com/dfsp-spirit/fsbrain/tree/v0.4.0 (URL)