Ooh Na Na
Description
This is a gzipped four-column TSV file that has hashes, prefixes, identifiers, and names for lots of biomedical entities, drawing from the OBO Foundry, ontologies in the Ontology Lookup Service, and many other nomenclature consortia that just haven't made it to the prime-time of standardized goodness. Ultimate, this dataset helps answer the question: what's my name? The hash is the hex digest of the MD5 hash of the CURIE in the form of <prefix>:<identifier>.
It's really a lot of work to get this stuff, so I tried to make it easy. It was generated with the following code in the shell:
pip install git+https://github.com/pyobo/pyobo.git obo database names
Notes
Files
Files
(4.7 GB)
Name | Size | Download all |
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md5:e3c018182942f190c67627002b19b8b8
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4.7 GB | Download |
md5:e22f1bf8747ee576ca32083eb8910d85
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623 Bytes | Download |
md5:e4c0304b9252c23bc1259599c06219fb
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1.3 kB | Download |