Published August 11, 2020
| Version 1.0
Dataset
Open
Single cell RNA-seq Data - Dissecting the functional reprogramming of the microenvironment in bone marrow fibrosis at the single cell level
Authors/Creators
- 1. Leimkühler1
- 2. Helene
- 3. Ronghui
- 4. Ivan
- 5. Rebekka
Description
We provide results regarding the bioinformatic analysis of scRNA-seq from distinct bone marrow fibrosis mouse models and human samples.
These include:
Robjects&Markdown - R markdown and R objects with QC statistics, UMAP and final scRNA-seq data sets.
Markers - Excel tables with cluster specific marker genes.
DE Genes - Excel table with DE genes when comparing cells in control vs. disease condition per cluster.
GO Analysis - Gene enrichment analysis of either DE genes. These are divided by either UP or down regulated genes.