Published July 31, 2020 | Version 0.1.4
Software Open

assembly_stats 0.1.4

Creators

  • 1. Smithsonian Institution

Description

Assembly_stats Python library, version 0.1.4

Assembly_stats is a Python library that takes a FASTA file as input and calculates both scaffold and contig statistics (N50, L50, etc.) from a scaffold FASTA file. It does this by breaking each scaffold wherever there is more than one N and then calculating statistics for both the scaffolds and contigs.

Files

MikeTrizna/assembly_stats-0.1.4.zip

Files (4.0 MB)

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md5:630b7be171e19c5758f1fc53cd397cc5
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Additional details

Related works

Is supplement to
https://github.com/MikeTrizna/assembly_stats/tree/0.1.4 (URL)