Dataset for Stairway Plot 2

File description: 

1. Fig 1A data.zip: blueprint files for producing Figure 1A.

2. Fig 2 data.zip: blueprint files for producing Figure 2. 

3. sharpCEU.macs.ms.out.gz: simulated sequence data based on the sharpCEU model in the ms format. Used for comparison in Supplementary Figure 3.

4. sharpYRI.macs.ms.out.gz: simulated sequence data based on the sharpYRI model in the ms format. Used for comparison in Supplementary Figure 4.

5. stairway-plot-v2-src.zip: Java source codes of Stairway Plot 2.

6. stairway_plot_v2.1.zip: executable package of Stairway Plot 2.

7. Supplementary Fig 1 data.zip: blueprint files and demographic models used in Supplementary Figure 1.

8. zig-zag-10Mx10.zip: simulated sequence data based on the zig-zag model in the ms format. Used for comparison in Figure 1B.