R code and output for "Improved two-step analysis of germination data from complex experimental designs"

This document contains all R code and output used for the manuscript entitled "Improved two-step analysis of germination data from complex experimental designs" , which describes an improved two-step analysis of germination data for complex experiments. The analysis involves simultaneous modelling of all estimated model parameters for separate fits of event-time data obtained from each container (Petri dish or pot). This approach allows visualization of observed cumulated data together with fitted curves.