Published June 26, 2020 | Version v1
Dataset Open

Supplementary data (simulated metagenome set 2) to accompany "phyloFlash – Rapid SSU rRNA profiling and targeted assembly from metagenomes"

Authors/Creators

  • 1. Max Planck Institute for Marine Microbiology
  • 2. University of Colorado, Denver Anschutz Medical Campus

Description

Comparison of SSU rRNA read extraction and targeted assembly from simulated shotgun metagenome of closely related Bacteorides strains.

The phyloFlash software is available from https://github.com/HRGV/phyloFlash. Examples were generated with phyloFlash v3.3b.

Files

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Additional details

Related works

Cites
Journal article: 10.1038/s41587-018-0008-8 (DOI)
Is supplement to
Preprint: 10.1101/521922 (DOI)
Software: 10.5281/zenodo.1327399 (DOI)