Published March 7, 2022 | Version 3.0.0
Dataset Open

Kraken2 Database (Human, SARS-CoV2)

Authors/Creators

  • 1. Robert Koch Institute

Description

Version 1.0.0:

Kraken2 Database built on human GRCH38.p13 and NCBI RefSeq genomes of SARS-CoV2 downloaded on 25.05.2020.

Update 2.0.0:

  • Kraken2 Database built on human GRCH38.p13 all GISAID SARS-CoV-2 Sequences available on 08 Feb 2021 that passed QC by https://gitlab.com/RKIBioinformaticsPipelines/president
  • fixed typo in the file name

Update 3.0.0

  • please refer for notes regarding database generation to the bundled README.md
  • Kraken2 Database built on human GCF_000001405.39_GRCh38.p13, 10% of GISAID SARS-CoV-2 sequences available on 2022-02-07 that passed QC by https://gitlab.com/RKIBioinformaticsPipelines/president

Files

Files (2.9 GB)

Name Size
md5:edb5f763f34389fea15e63d9085c468f
2.9 GB Download