Published May 23, 2020
| Version v1
Dataset
Open
Plant_Innate_Immunity_ATAC-seq
Description
Chromatin accessibility landscapes activated by cell surface and intracellular immune receptors
Ding et al 2020
This repository stored all input dataset & output dataset except bam files.
To make bam files, raw read data are stored in accession number PRJEB38923.
- ACR_annotation.zip, Correlation_replicates.zip, Integrate_ATAC-seq_and_RNA-seq.zip, Motif_binding_analysis.zip ... input/output files for each analysis.
- other zip files ... output files of MACS (call ACRs, call DARs)
- These outputs are generated by scripts stored in github. (https://github.com/slt666666/Plant_Innate_Immunity_ATAC-seq)
Files
ACR_annotation.zip
Files
(18.8 GB)
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