Dataset and Data analysis "Multimodal vibrational studies of drug uptake in vitro: Is the whole greater than the sum of their parts?"
Description
Data Analysis for the publication 10.1002/jbio.202000264.
It is divided in three different folders describing three different part of the data analysis:
A. DATA TREATMENT RAMAN (Folder 1)
1. Import data using the Import_Raman script.
2. Plot Spectra and integrate DOX band
Figure 1A
Figure 1B
3. PCA
Figure 1D
Figure 1C
SM 1
4. PLS
Figure 1F
Figure 1E
B. ANALYSIS OF IR DATA AND MULTIMODAL IR-RAMAN OF DOX UPTAKE (Folder 2)
1 Load Data IR
2 Exploratory Analysis IR
Figure 2A
3 PCA
SM 2
4. Partial Least Squares vs time
Figure 2C
Figure 2B
5. Partial Least Squares vs Raman Signal
Figure 2E
Figure 2D
6. Make Averages and clean up Data for DATA Fusion
IR
Raman
7. 2DCORR
Figure 3B
8. MCR_ALS WITH DATA FUSION
Fitting of the concentration of Raman using the method in [9].
MCR-ALS
Figures 4 A, B and C
C. SIMULATION (Folder 3)
1. Load Raman DATA
2. Simulate Raman DAta
3. Load and simulate IR Data
4. 2D corr
Figure 3A
. Each folder contains a .mlx with the data analysis performed. Figures numbering corresponds to the one found in the article.
Files
1.Raman_Analysis.zip
Additional details
Related works
- Is supplement to
- 10.1002/jbio.202000264 (DOI)