Published April 20, 2020 | Version 1.0

Tracking wheat yellow rust: near real-time data sharing with Nextstrain

  • 1. John Innes Centre
  • 2. University of Basel

Description

Puccinia striiformis f. sp. tritici (Pst) is the causative agent of wheat yellow rust disease, affecting wheat production worldwide. In order to effectively manage this disease, it is important to monitor the genotypes present through surveillance programs. Additionally, the use of public, open source tools such as the Nextstrain toolkit allow for rapid and efficient sharing of data from surveillance programmes. Here we present a Nextstrain instance for Pst, which will be a valuable resource for understanding and tracking the distribution of specific genotypes of this important pathogen.

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Adams et al.pdf

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Additional details

Funding

European Commission
RUSTWATCH - RustWatch: A European early-warning system for wheat rust diseases 773311
European Commission
DeMMYR - Decoding the molecular mechanisms driving host adaptation of yellow rust on cereal crops and grasses 715638