Dataset Open Access
Inspector Javert's Xref Database
Charles Tapley Hoyt
It would have been really useful for Inspector Javert to find Jean Valjean if he had the cross-references between the identifies of all of the people he met in Montreuil-sur-Mer to the prisoner database (all he needed was 24601!). Since this dataset has a long name, you can feel free to abbreviate it as IJXD.
We have the same problem in bioinformatics, so this is a database of cross-references extracted from OBO Foundry and other sources by PyOBO. It is a gzipped five-column TSV file that has source namespace, source identifier, target namespace, target identifier, and provenance. Each has been normalized so cross-references from different sources can be integrated and traversed.
It was generated with the following code in the shell:
pip install git+https://github.com/pyobo/pyobo.git obo javerts-xrefs
| Name | Size | |
|---|---|---|
|
inspector_javerts_xref_summary.tsv
md5:c5f2ee6299887cfa88b440285c7096cb |
6.7 kB | Download |
|
inspector_javerts_xrefs.tsv.gz
md5:d5fbf825e7dda6e74952ca0c06736d5a |
9.3 MB | Download |
|
inspector_javerts_xrefs_sample.tsv
md5:fb62c24116e017c845e4a67e6c061a85 |
245 Bytes | Download |
| All versions | This version | |
|---|---|---|
| Views | 189 | 71 |
| Downloads | 72 | 18 |
| Data volume | 13.6 GB | 92.8 MB |
| Unique views | 158 | 56 |
| Unique downloads | 41 | 10 |
- Publication date:
- April 19, 2020
- DOI:
-
- Keyword(s):
- Cross References Ontologies Namespaces
- Communities:
- License (for files):
- Creative Commons Attribution 4.0 International