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Dataset Open Access

Illumina reads SARS-Cov-2 using amplicon enrichment

Maria Iglesias-Caballero; Sara Monzon; Sarai Varona; Isabel Cuesta; Inmaculada Casas

Testing data for nf-core/viralrecon pipeline.Here we share two samples with illumina reads obtained from a enrichment experiment using Artic network amplicons for SARS-Cov-2 virus. We also share the fasta and bed file with the localization of the primers in the virus genome.

Files (761.2 MB)
Name Size
nCoV-2019.artic.primers.fasta
md5:ba1ba315a45fee8861aaa28e4cace0e2
8.8 kB Download
nCoV-2019.schemeMod.bed
md5:3af3496ccab8745d24e47e3c63e9bfd2
9.1 kB Download
sample1_R1.fastq.gz
md5:74fd9818b4c49c918a0f185c67ff0b67
199.2 MB Download
sample1_R2.fastq.gz
md5:c805baf5181dc0f9be059b9cb722481a
236.5 MB Download
sample2_R1.fastq.gz
md5:ca3cc4753d9310d7e8140be9766f114b
149.7 MB Download
sample2_R2.fastq.gz
md5:cc0ae17430065c18a7db90347c534e54
175.8 MB Download
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