Published December 1, 2019
| Version v2
Dataset
Open
MePPi: A complete and flexible workflow for metaproteomics data analyses
Authors/Creators
- 1. Robert Koch-Institute
- 2. Otto von Guericke University Magdeburg
Description
Data for an examplary metaproteomics data analysis with the MetaProteomeAnalyzer (MPA) and Prophane software tools. Data is from the PRIDE dataset PXD010550.
Files include:
- protein databases (FASTA) :
- UniProt Swiss-Prot: UniprotSwP-2020_03.fasta
- Metagenome (+ Swiss-Prot): MG_BG__UPSP.fasta
- MS Datasets (MGF):
- FASP digetst: FASP_BGP_A.mgf
- in get digest: InGel_BGP_A.mgf
- MPA data dump including preprocessed UniProt Swiss-Prot FASTA (optionally used by conda mpa-server package)
Files
mpa_ressources_incl_swissprot_03-2020.zip
Files
(2.7 GB)
| Name | Size | Download all |
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md5:f2e47972a8d6c8da87b288d04846dc67
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276.0 MB | Download |
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md5:d184d14a50a449e1994675f783ff6b2d
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213.0 MB | Download |
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md5:49bb43f8550bb1d1f1847fa3f527d373
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866.8 MB | Download |
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md5:f6655c0360dd1ad0449defb92e0e38cd
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1.1 GB | Preview Download |
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md5:8c2c072fa62ea2ef0af5f81825d63438
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229.7 MB | Download |