Published December 1, 2019
| Version v2
Dataset
Open
MePPi: A complete and flexible workflow for metaproteomics data analyses
Authors/Creators
- 1. Robert Koch-Institute
- 2. Otto von Guericke University Magdeburg
Description
Data for an examplary metaproteomics data analysis with the MetaProteomeAnalyzer (MPA) and Prophane software tools. Data is from the PRIDE dataset PXD010550.
Files include:
- protein databases (FASTA) :
- UniProt Swiss-Prot: UniprotSwP-2020_03.fasta
- Metagenome (+ Swiss-Prot): MG_BG__UPSP.fasta
- MS Datasets (MGF):
- FASP digetst: FASP_BGP_A.mgf
- in get digest: InGel_BGP_A.mgf
- MPA data dump including preprocessed UniProt Swiss-Prot FASTA (optionally used by conda mpa-server package)