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Published February 22, 2020 | Version 1.7.4
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nextgenusfs/funannotate: funannotate v1.7.4

Creators

  • 1. USDA Forest Service
  • 2. University of California-Riverside

Description

Okay, so apparently I lied about bug fixes before py3 release. Here are some quick ones.

Also -- some users have said that conda recipe fails to find a solution, with the help of @reslp this is perhaps caused by ete3 package as a dependency. Since ete3 is only used in funannotate for the dN/dS calculation in funannotate compare, I'm going to remove it from conda recipe as a dependency. Users that would like to continue using the dN/dS function in compare will need to manually install ete3 (ie conda could work on your system or pip, etc).

  • update the log file copy/remove in funannotate annotate which causes a problem in singularity container
  • encoding bug fixes for some PFAM results
  • fix for funannotate iprscan which was not correctly combining XML files with newer versions of Interproscan.

Files

nextgenusfs/funannotate-1.7.4.zip

Files (494.5 kB)

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Additional details

Related works

Is supplement to
https://github.com/nextgenusfs/funannotate/tree/1.7.4 (URL)