Dataset Open Access

MD Simulations HsGluN1/GluN2A WT/F553A

Burger, Pieter; Kell, Steven

Molecular dynamics simulation of the HsGluN1/GluN2A WT and F553A (GluN2A) mutant.

 

HsGluN12AA_used_1.pdb is the full-length model that was used for the simulations following truncation of the ATDs.

 

This dataset is from "NMDA Receptor Channel Gating Control by the Pre-M1 Helix" by Miranda J. McDaniel, Kevin K. Ogden, Steven A. Kell, Pieter B. Burger, Dennis C. Liotta, and Stephen F. Traynelis (2020).

Files (13.6 GB)
Name Size
F553A_2A-chainD-cluster1_2278.pdb
md5:ea50f9579579c648c4923734b14b7224
2.1 MB Download
HsGluN12AA_F553A_MD.tar.bz2
md5:741b60d3c0334f1b91b3a6bef77c9ad6
6.8 GB Download
HsGluN12AA_used_1.pdb
md5:eb8cf45cb3c052207c8e525972f660fd
2.0 MB Download
HsGluN12AA_WT_MD.tar.bz2
md5:8601f0090014b7c1007aa37cd401654a
6.8 GB Download
model-renumbering_final.tcl
md5:5dc249e026a656c3884248ca814df867
1.7 kB Download
Trajectory-protein-renumbering-intstructions.docx
md5:f52708477ed96a2c450c9c1737f718b2
14.1 kB Download
WT_2A-chainD-cluster1_2178.pdb
md5:35ab630cbacb2abd565a481cf639b130
2.1 MB Download
WT_N1-chainA-cluster1_1856.pdb
md5:47bfc5798fd8eb1c0a4109115b6b34c6
2.1 MB Download
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