MetaPhlAn 2.2.0 taxonomic profiling of the CAMI 2 Mouse Gut Toy data set, samples 0-63

Software: MetaPhlAn
SoftwareVersion: 2.2.0
DataURL: https://data.cami-challenge.org/participate
SoftwareURL: https://bitbucket.org/biobakery/metaphlan2
DockerImage: stefanjanssen/docker_profiling_tools:metaphlan2
IsBiobox: True
BioboxYAMLFile: https://zenodo.org/record/3629567/files/biobox.yaml?download=1
ReferenceDatabase: mpa_v20_m200
ShortReadsUsed: True
LongReadsUsed: False
CommandsUsed: docker run \
--volume="/path/to/19122017_mousegut_scaffolds_yaml:/bbx/mnt/yaml:ro" \
--volume="/path/to/19122017_mousegut_scaffolds:/bbx/mnt/input:ro" \
--volume="/path/to/output:/bbx/mnt/output:rw" \
--volume="/path/to/output/metadata:/bbx/metadata:rw" \
--volume="/path/to/output/cache:/cache:rw" \
stefanjanssen/docker_profiling_tools:metaphlan2