Critical Assessment of Metagenome Interpretation
Published January 28, 2020 | Version 4.6
Dataset Open

CAT 4.6 taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly

Authors/Creators

  • 1. Helmholtz Centre for Infection Research

Description

Taxonomic binning of the gold standard pooled assembly
Software: CAT
SoftwareVersion: 4.6
DataURL: https://data.cami-challenge.org/participate
SoftwareURL: https://github.com/dutilh/CAT
ReferenceDatabase: prebuilt 2018-12-12
Taxonomy: NCBI 2018-12-12
ShortReadsUsed: False
LongReadsUsed: False
CommandUsed: CAT contigs -c anonymous_gsa_pooled.fasta -d CAT_prepare_20181212/2018-12-12_CAT_database/ -t CAT_prepare_20181212/2018-12-12_taxonomy/ --tmpdir tmp --nproc 16

Files

Files (8.9 MB)

Name Size Download all
md5:e51494bc4832ccf612e80dbe0af4f686
8.9 MB Download