Published December 11, 2019
| Version 170113 (13-JAN-2017)
Dataset
Open
Natrialba magadii theoretical proteome exported from HaloLex
Description
The theoretical proteome is derived from the annotated Natrialba magadii ATCC 43099 genome (Siddaramappa et al, 2012).
This proteome represents a Gold Standard Protein based annotation (Pfeiffer and Oesterhelt, 2015).
This proteome was exported from HaloLex (Pfeiffer et al, 2008)
A proteome study is based on this version of the theoretical proteome (Cerletti et al, 2018).
Notes
It should be noted that the database has 4295 entries but was erroneously claimed to have 4023 entries in Cerletti et al, 2018.
Files
Files
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Additional details
References
- Siddaramappa et al, 2012, A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T, BMC Genomics (2012) 13: 165 (doi: 10.1186/1471-2164-13-165).
- Pfeiffer and Oesterhelt, 2015, A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes, Life (Basel) (2015) 5:1427-1444 (doi: 10.3390/life5021427)
- Pfeiffer et al, 2008, Genome information management and integrated data analysis with HaloLex, Arch Microbiol (2008) 190: 281-299 (doi: 10.1007/s00203-008-0389-z).