Published December 4, 2019
| Version v3
Dataset
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Nanopore long reads enable the first complete genome assembly of a Malaysian Vibrio parahaemolyticus isolate bearing the pVa plasmid associated with acute hepatopancreatic necrosis disease
Description
Supplemental File 1: Main genome assemblies (Unpolished Flye assembly, Polished Flye assembly, Unicycler Hybrid Assembly and Unicycler Illumina-only assembly) generated in this study for comparison and their BUSCO output.
Supplemental File 2: Phyre2 protein modelling output of the putative MVP1 TcdA toxin
Supplemental File 3: Phyre2 protein modelling output of the putative MVP1 TcdB toxin
Supplemental File 4: Phyre2 protein modelling output of the putative MVP1 TccC toxin
Supplemental File 5: InterProScan output of the NCBI-predicted MVP1 proteome.
Supplemental Table 1: NCBI BlastN output using the fuc genes of Vibrio parahaemolyticus MVP1 as the query to search against the Vibrio reference WGS database as of 21 Oct 2019
Files
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