Dataset Open Access

Chloroplast genome sequencing reads from sweet potato

Syme, Anna

Tutorial data for chloroplast genome assembly: fastq reads from illumina and nanopore sequencing for the sweet potato.

Data from: Zhou C, Duarte T, Silvestre R et al. 2018 (https://doi.org/10.12688/gatesopenres.12856.1), hosted at EBI ENA under accession numbers: illumina (SRR6828568) and nanopore (SRR6828567).

This is how the files have been changed from the original datasets: 

illumina-reduced: has the first 62,500 reads only

illumina-tiny: has the first 12,500 reads only

nanopore-reduced: has the first 2,000 reads only

nanopore-tiny: has the first 250 reads only

 

Files (51.3 MB)
Name Size
sweet-potato-chloroplast-illumina-reduced.fastq
md5:dbfe5a776556d9f2ed852a6d3cefb4cc
17.6 MB Download
sweet-potato-chloroplast-illumina-tiny.fastq
md5:3187ca83b62fe80a4eff63f18b2fa449
3.5 MB Download
sweet-potato-chloroplast-nanopore-reduced.fastq
md5:0dae70302fed6c4189ac160663f97af0
26.8 MB Download
sweet-potato-chloroplast-nanopore-tiny.fastq
md5:894ff34d3d2e9e7d8ccad05cf81fe46a
3.4 MB Download
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